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Human NCBI build 33 vs. Mouse NCBI build 30

• Conserved segments:       mouse       human
• Anchoring islands (zip format, 131KB)
• Synteny map

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Human NCBI build 31 vs. Mouse NCBI build 30

• Conserved segments:       mouse       human
• Anchoring islands (zip format, 132KB)
• Synteny map

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Human NCBI build 30 vs. Mouse MGSCv3

• Conserved segments:       mouse       human
• Anchoring islands (zip format, 134KB)
• Synteny map

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• Publication
• The UniMarker (UM) Method for Synteny Mapping of Large Genomes.
  Ben-Yang Liao, Yu-Jung Chang, Jan-Ming Ho, and Ming-Jing Hwang
  Bioinformatics, in press.
  the supplementary figures in PDF format can be downloaded [here]
  
  
• Source codes and binary files
• Documentation
• README (HTML)
• README (DOC)
• Download
• Compressed source codes (zip format)
• List of source codes in detail:

	Step 0-A. Find the UM of human and mouse genomes
find_ump.zip	Step 0-B. Find the UMp between human and mouse genomes
anchoring.zip	Step 1. From UMp to anchoring-islands (overlapped) Identify anchoring islands between human and mouse genomes
resolving.zip	Step 2. Overlapped anchoring islands to non-overlapped anchoring islands Resolve overlapped anchoring islands, and extract intersected regions
merging.zip	3. From anchoring islands to conserved segments and syntenic blocks A. Merge anchoring islands into conserved segments B. Group conserved segments into syntenic blocks

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Corresponding Author: Ming-Jing Hwang

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Research teams: [BBM Lab @ IBMS Sinica] [CSCL @ IIS Sinica]

¡P Web at IBMS.Sinica:	http://synteny.ibms.sinica.edu.tw/
¡P Mirror site at IIS.Sinica:	http://kp03.iis.sinica.edu.tw/synteny/supplement/ (Website author: Yu-Jung Chang)

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